What eight studies say about choosing a somatic variant caller
Eight published somatic SNV and indel caller comparisons, read side by side: rankings change between studies, indel accuracy is lower, and no study covers FFPE, ctDNA or panels.
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#oncology
2 articles tagged with #oncology.
What the benchmarks say about choosing an RNA fusion caller
Short-read callers recover most validated driver fusions in haematologic cell lines but differ by orders of magnitude in review burden. Long-read callers score far lower in an independent benchmark. No comparison covers solid tumours or FFPE tissue.
